RDM in Bioimage Analysis
An integral aspect of bioimaging is the processing and analysis of acquired images. Image analysis workflows range in complexity from simple processing steps to sophisticated, highly-automated workflow configurations. Documentation of image analysis workflows is vital. In many regards, research data management and bioimage analysis are intricately linked to each other.
Here we provide an overview and point of entry for research data management for and around bioimage analysis..
(under construction!)
Perspective: The motivation for proper RDM in image analysis (by Tom Boissonnet)
Data management is made for bioimage analysts How often have you wondered about how to structure your folders, if you should write metadata within a single txt or json file or in one file for each image, how to name your images consistently so that your code will be able to find them? Well all these problems disappear when you adopt a research data management solution like OMERO. Of course, there is one step that one cannot skip, which is data annotation. But this is outweighed by the benefits you will get. Annotating data without overdoing it First off, there are different kinds of annotation. In the case of Key-Value pairs, the topic is certainly vast, and you should [...]
